Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.100 Biomarker disease BEFREE [<sup>18</sup>F]FB-GAcDb immunoPET was further evaluated in a disseminated lymphoma (A20-hCD20) syngeneic for hCD20TM and compared to [<sup>18</sup>F]FDG PET. 30456475 2019
Entrez Id: 84061
Gene Symbol: MAGT1
MAGT1
0.040 GeneticVariation disease BEFREE XMEN disease (X-linked immunodeficiency with Magnesium defect, Epstein-Barr virus infection and Neoplasia) is a novel primary immune deficiency caused by mutations in MAGT1 and characterised by chronic infection with Epstein-Barr virus (EBV), EBV-driven lymphoma, CD4 T-cell lymphopenia, and dysgammaglobulinemia [1]. 25504528 2015
Entrez Id: 268
Gene Symbol: AMH
AMH
0.020 Biomarker disease BEFREE Women with lymphoma and leukaemia have been shown to have reduced AMH concentrations, but it is unknown if the FD is also reduced. 31782794 2019
Entrez Id: 201294
Gene Symbol: UNC13D
UNC13D
0.010 GeneticVariation disease BEFREE Within 2 epidemiological screening programs in northern Sweden, an area demonstrating a founder effect of this specific UNC13D mutation, all individuals with a diagnosis of lymphoma (487 patients) and matched controls (1844 controls) were assessed using polymerase chain reaction for carrier status. 30758854 2019
Entrez Id: 23111
Gene Symbol: SPART
SPART
0.010 Biomarker disease BEFREE With the exception of a single tumor sample, a correct prediction of lymphoma or normal sample was made in a blinded analysis of the validation series using a combination of SNCA and SPG20. 24362313 2014
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.020 Biomarker disease BEFREE With the exception of a single tumor sample, a correct prediction of lymphoma or normal sample was made in a blinded analysis of the validation series using a combination of SNCA and SPG20. 24362313 2014
Entrez Id: 2212
Gene Symbol: FCGR2A
FCGR2A
0.010 GeneticVariation disease BEFREE With rituximab, FCGR3A and FCGR2A high-affinity polymorphisms have been associated with clinical response in lymphoma but not in CLL, suggesting potential divergent mechanisms of action between these 2 diseases. 15217834 2005
Entrez Id: 2214
Gene Symbol: FCGR3A
FCGR3A
0.030 Biomarker disease BEFREE With rituximab, FCGR3A and FCGR2A high-affinity polymorphisms have been associated with clinical response in lymphoma but not in CLL, suggesting potential divergent mechanisms of action between these 2 diseases. 15217834 2005
Entrez Id: 28402
Gene Symbol: IGHV3-69-1
IGHV3-69-1
0.090 Biomarker disease BEFREE With one possible exception, none of these lymphoma VH sequences appear to represent any of the VH3 genes that may be preferentially used in the fetal repertoire. 1909196 1991
Entrez Id: 6545
Gene Symbol: SLC7A4
SLC7A4
0.010 Biomarker disease BEFREE With one possible exception, none of these lymphoma VH sequences appear to represent any of the VH3 genes that may be preferentially used in the fetal repertoire. 1909196 1991
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 Biomarker disease BEFREE With limited sample size, gradient boosting can differentiate endophthalmitis from uveitis and lymphoma by IL-6 and IL-10 with high sensitivity and specificity; however, a larger cohort is needed for further validation. 28157416 2017
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.100 Biomarker disease BEFREE With limited sample size, gradient boosting can differentiate endophthalmitis from uveitis and lymphoma by IL-6 and IL-10 with high sensitivity and specificity; however, a larger cohort is needed for further validation. 28157416 2017
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.100 Biomarker disease BEFREE Whole-body MRI versus <sup>18</sup>F-FDG PET/CT for pretherapeutic assessment and staging of lymphoma: a meta-analysis. 29950864 2018
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 AlteredExpression disease BEFREE Whilst the strong labelling for phosphotyrosine observed in the lymphoma cells is due to the presence of activated ALK, the strong staining of some normal cells presumably represents physiologically active kinases and this should be taken into account when interpreting the immunostaining of non-lymphoid tumours. 10398126 1999
Entrez Id: 200081
Gene Symbol: TXLNA
TXLNA
0.020 Biomarker disease BEFREE While serum BAFF was negatively associated with the presence of both traditional anti-SSA/Ro and novel TSA antibodies in GI lymphoma patient, IL14 was positively associated with the presence of both traditional anti-SSA/Ro and novel TSA antibodies in non-GI lymphoma patient. 30766889 2019
Entrez Id: 943
Gene Symbol: TNFRSF8
TNFRSF8
0.100 Biomarker disease BEFREE While our understanding of the biology of CD30 in lymphoma continues to evolve, our need to detect and measure its expression at the protein level remains critically important for diagnosis and patient care. 31567279 2020
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.070 Biomarker disease BEFREE While miR-17~92 was dispensable for mouse retinal development, miR-17~92 overexpression, together with deletion of Rb and p107, led to rapid emergence of retinoblastoma with frequent metastasis to the brain. miR-17~92 oncogenic function in retinoblastoma was not mediated by a miR-19/PTEN axis toward apoptosis suppression, as found in lymphoma/leukemia models. 21816922 2011
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE Whereas loss of p53 function promotes leukemia and lymphoma development in humans and mice, increased p53 activity inhibits hematopoietic stem cell function and results in myelodysplasia. 23018641 2012
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.100 Biomarker disease BEFREE Whereas a single or limited exposure of lymphoma cells to rituximab may lead to a favorable ratio of proapoptotic to antiapoptotic Bcl-2 family proteins, repeated exposure to rituximab is associated with a therapy-resistant phenotype via modulation of Bax and Bak expression. 18316580 2008
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 Biomarker disease BEFREE Whereas ALK-fusion proteins are common in lymphoma and lung cancer, there are few reports of ALK rearrangements in NB indicating that ALK mainly exerts its oncogenic capacity via activating mutations and/or overexpression in this tumor type. 25251827 2015
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.090 AlteredExpression disease BEFREE When the tumor reactivity of dominant clonotypic TCRs in each mouse was analyzed, 9 of 13 TCRs induced the secretion of IFNγ in response to, and showed killing of, B16F10 cells <i>in vitro</i>, and 2 of them showed strong antitumor activity <i>in vivo</i> Concerning their antigen specificity, 7 of them reacted to p15E peptide of endogenous murine leukemia virus-derived envelope glycoprotein 70, and the rest reacted to tumor-associated antigens expressed on EL4 lymphoma as well as B16 melanoma cells. 29475880 2018
Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
0.100 Biomarker disease BEFREE When coupled with an anti-CD19 targeted antibody, this formulation was also effective at delivering an MDR1 asODN to a multidrug-resistant human B-lymphoma cell line in vitro, decreasing the activity of P-glycoprotein. 10766353 2000
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.100 Biomarker disease BEFREE When coupled with an anti-CD19 targeted antibody, this formulation was also effective at delivering an MDR1 asODN to a multidrug-resistant human B-lymphoma cell line in vitro, decreasing the activity of P-glycoprotein. 10766353 2000
Entrez Id: 406991
Gene Symbol: MIR21
MIR21
0.040 AlteredExpression disease BEFREE When co-cultured with immune cells and endothelial cells, miR21-overexpressing B-lymphoma cells were resistant to chemotherapeutic agents, but sensitive to Bcl-2 inhibitor ABT-199, irrespective of Bcl-2 expression on lymphoma cells. 28637496 2017
Entrez Id: 1071
Gene Symbol: CETP
CETP
0.010 AlteredExpression disease BEFREE When 141 malignant lymphomas of various subtypes were studied, high expression of CETP, equivalent to that found in normal germinal centre B cells, was demonstrated in lymphoma subtypes that are currently regarded as the neoplastic counterparts of primarily germinal centre B cells. 15228446 2004